ants package¶
Subpackages¶
- ants.core package
- Submodules
- ants.core.ants_image module
ANTsImage
ANTsImage.abp_n4()
ANTsImage.abs()
ANTsImage.add_noise_to_image()
ANTsImage.anti_alias()
ANTsImage.apply()
ANTsImage.argmax()
ANTsImage.argmin()
ANTsImage.argrange()
ANTsImage.astype()
ANTsImage.clone()
ANTsImage.copy()
ANTsImage.create_tiled_mosaic()
ANTsImage.create_warped_grid()
ANTsImage.crop_image()
ANTsImage.crop_indices()
ANTsImage.decrop_image()
ANTsImage.denoise_image()
ANTsImage.direction
ANTsImage.flatten()
ANTsImage.functional_lung_segmentation()
ANTsImage.fuzzy_spatial_cmeans_segmentation()
ANTsImage.get_average_of_timeseries()
ANTsImage.get_center_of_mass()
ANTsImage.get_centroids()
ANTsImage.get_mask()
ANTsImage.get_neighborhood_at_voxel()
ANTsImage.get_neighborhood_in_mask()
ANTsImage.get_orientation()
ANTsImage.get_pointer_string()
ANTsImage.histogram_equalize_image()
ANTsImage.iMath()
ANTsImage.iMath_GC()
ANTsImage.iMath_GD()
ANTsImage.iMath_GE()
ANTsImage.iMath_GO()
ANTsImage.iMath_MC()
ANTsImage.iMath_MD()
ANTsImage.iMath_ME()
ANTsImage.iMath_MO()
ANTsImage.iMath_canny()
ANTsImage.iMath_fill_holes()
ANTsImage.iMath_get_largest_component()
ANTsImage.iMath_grad()
ANTsImage.iMath_histogram_equalization()
ANTsImage.iMath_laplacian()
ANTsImage.iMath_maurer_distance()
ANTsImage.iMath_normalize()
ANTsImage.iMath_pad()
ANTsImage.iMath_perona_malik()
ANTsImage.iMath_propagate_labels_through_mask()
ANTsImage.iMath_sharpen()
ANTsImage.iMath_truncate_intensity()
ANTsImage.image_math()
ANTsImage.image_to_cluster_images()
ANTsImage.kmeans_segmentation()
ANTsImage.label_clusters()
ANTsImage.label_image_centroids()
ANTsImage.label_stats()
ANTsImage.labels_to_matrix()
ANTsImage.list_to_ndimage()
ANTsImage.mask_image()
ANTsImage.max()
ANTsImage.mean()
ANTsImage.median()
ANTsImage.min()
ANTsImage.morphology()
ANTsImage.motion_correction()
ANTsImage.movie()
ANTsImage.multi_label_morphology()
ANTsImage.n3_bias_field_correction()
ANTsImage.n3_bias_field_correction2()
ANTsImage.n4_bias_field_correction()
ANTsImage.ndimage_to_list()
ANTsImage.new_image_like()
ANTsImage.nonzero()
ANTsImage.numpy()
ANTsImage.orientation
ANTsImage.origin
ANTsImage.otsu_segmentation()
ANTsImage.pad_image()
ANTsImage.plot()
ANTsImage.plot_hist()
ANTsImage.plot_ortho()
ANTsImage.prior_based_segmentation()
ANTsImage.quantile()
ANTsImage.range()
ANTsImage.reflect_image()
ANTsImage.reorient_image2()
ANTsImage.resample_image()
ANTsImage.resample_image_to_target()
ANTsImage.rgb_to_vector()
ANTsImage.scalar_to_rgb()
ANTsImage.set_direction()
ANTsImage.set_origin()
ANTsImage.set_spacing()
ANTsImage.slice_image()
ANTsImage.smooth_image()
ANTsImage.spacing
ANTsImage.split_channels()
ANTsImage.std()
ANTsImage.sum()
ANTsImage.symmetrize_image()
ANTsImage.threshold_image()
ANTsImage.to_file()
ANTsImage.to_filename()
ANTsImage.to_nibabel()
ANTsImage.unique()
ANTsImage.vector_to_rgb()
ANTsImage.view()
ANTsImage.weingarten_image_curvature()
allclose()
copy_image_info()
get_direction()
get_origin()
get_spacing()
image_physical_space_consistency()
image_type_cast()
set_direction()
set_origin()
set_spacing()
- ants.core.ants_image_io module
- ants.core.ants_metric module
- ants.core.ants_metric_io module
- ants.core.ants_transform module
ANTsTransform
apply_ants_transform()
apply_ants_transform_to_image()
apply_ants_transform_to_point()
apply_ants_transform_to_vector()
compose_ants_transforms()
get_ants_transform_fixed_parameters()
get_ants_transform_parameters()
invert_ants_transform()
set_ants_transform_fixed_parameters()
set_ants_transform_parameters()
transform_index_to_physical_point()
transform_physical_point_to_index()
- ants.core.ants_transform_io module
- Module contents
- ants.learn package
- ants.lib package
- ants.registration package
- Submodules
- ants.registration.affine_initializer module
- ants.registration.apply_transforms module
- ants.registration.build_template module
- ants.registration.create_jacobian_determinant_image module
- ants.registration.create_warped_grid module
- ants.registration.fsl2antstransform module
- ants.registration.interface module
- ants.registration.make_points_image module
- ants.registration.metrics module
- ants.registration.reflect_image module
- ants.registration.reorient_image module
- ants.registration.resample_image module
- ants.registration.symmetrize_image module
- Module contents
- ants.segmentation package
- Submodules
- ants.segmentation.anti_alias module
- ants.segmentation.atropos module
- ants.segmentation.joint_label_fusion module
- ants.segmentation.kelly_kapowski module
- ants.segmentation.kmeans module
- ants.segmentation.label_geometry_measures module
- ants.segmentation.otsu module
- ants.segmentation.prior_based_segmentation module
- Module contents
- ants.utils package
- Submodules
- ants.utils.bias_correction module
- ants.utils.channels module
- ants.utils.convert_nibabel module
- ants.utils.crop_image module
- ants.utils.denoise_image module
- ants.utils.get_ants_data module
- ants.utils.get_centroids module
- ants.utils.get_mask module
- ants.utils.get_neighborhood module
- ants.utils.iMath module
iMath()
iMath_GC()
iMath_GD()
iMath_GE()
iMath_GO()
iMath_MC()
iMath_MD()
iMath_ME()
iMath_MO()
iMath_canny()
iMath_fill_holes()
iMath_get_largest_component()
iMath_grad()
iMath_histogram_equalization()
iMath_laplacian()
iMath_maurer_distance()
iMath_normalize()
iMath_pad()
iMath_perona_malik()
iMath_propagate_labels_through_mask()
iMath_sharpen()
iMath_truncate_intensity()
image_math()
multiply_images()
- ants.utils.image_similarity module
- ants.utils.image_to_cluster_images module
- ants.utils.impute module
- ants.utils.label_clusters module
- ants.utils.label_image_centroids module
- ants.utils.label_stats module
- ants.utils.labels_to_matrix module
- ants.utils.mask_image module
- ants.utils.mni2tal module
- ants.utils.morphology module
- ants.utils.multi_label_morphology module
- ants.utils.ndimage_to_list module
- ants.utils.pad_image module
- ants.utils.process_args module
- ants.utils.quantile module
- ants.utils.scalar_rgb_vector module
- ants.utils.slice_image module
- ants.utils.smooth_image module
- ants.utils.threshold_image module
- ants.utils.weingarten_image_curvature module
- Module contents
- ants.viz package